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Bioinformatics Solutions on AWS Book - Preview

Bioinformatics Solutions on AWS Book - Preview

This is the introductory chapter to my new book, Bioinformatics Solutions on AWS. (I am aware that the links surrounded by brackets don't work. This is meant to be a book, not a website, but I will use the power of find and sed in order to bend

Deploy Dash with Helm on Kubernetes with AWS EKS

Deploy Dash with Helm on Kubernetes with AWS EKS

Today we are going to be talking about Deploying a Dash App on Kubernetes with a Helm Chart using the AWS Managed Kubernetes Service EKS. For this post, I'm going to assume that you have an EKS cluster up and running because I want to focus more on

RShiny Authentication with Polished on AWS Kubernetes

RShiny Authentication with Polished on AWS Kubernetes

If you're looking for a hassle free way to add authentication to your RShiny Apps you should check out polished.tech. In their own words: Polished is an R package that adds authentication, user management, and other goodies to your Shiny apps. Polished.tech is the quickest and

Deploy and Scale your Dask Cluster with Kubernetes

Deploy and Scale your Dask Cluster with Kubernetes

Dask is a parallel computing library for Python. I think of it as being like MPI without actually having to write MPI code, which I greatly appreciate! Dask natively scales Python Dask provides advanced parallelism for analytics, enabling performance at scale for the tools you love https://dask.org One

Deploy RShiny with Kubernetes using AWS EKS and Terraform

Deploy RShiny with Kubernetes using AWS EKS and Terraform

Deploy RShiny on AWS EKS with Terraform Today we will be deploying the rocker/shiny image on Kubernetes with AWS, or EKS. If you're following along with the deploy RShiny on AWS Series, you'll know that I covered deploying RShiny with a helm chart . Today, I

Deploy RShiny on Kubernetes with a Helm Chart

Deploy RShiny on Kubernetes with a Helm Chart

If you want a very robust solution to deploy your RShiny applications a managed Kubernetes service on AWS, or EKS, is a great choice! Kubernetes has, for now, fully dominated the DevOps and deployment space in terms of deploying containerized services. If you'd like to learn more about

Dask Tips and Tricks – HighLevelGraphs

Dask Tips and Tricks – HighLevelGraphs

For those of you who have written MPI, this is kind of like that, except you don't have to write MPI!If you would like to know more about basic Dask syntax, check out my blog post on Parallelizing For Loops with Dask. Dask Syntax Normally when using